Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NME8Q8N427 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.09■□□□□ 0.97
NME8Q8N427 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.08■□□□□ 0.97
NME8Q8N427 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NME8Q8N427 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
NME8Q8N427 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NME8Q8N427 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME8Q8N427 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.08■□□□□ 0.97
NME8Q8N427 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.08■□□□□ 0.97
NME8Q8N427 MYC-208ENST00000641036 567 ntBASIC21.08■□□□□ 0.97
NME8Q8N427 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NME8Q8N427 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NME8Q8N427 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NME8Q8N427 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NME8Q8N427 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NME8Q8N427 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.08■□□□□ 0.96
NME8Q8N427 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.07■□□□□ 0.96
NME8Q8N427 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.07■□□□□ 0.96
NME8Q8N427 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.07■□□□□ 0.96
NME8Q8N427 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.07■□□□□ 0.96
NME8Q8N427 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.07■□□□□ 0.96
NME8Q8N427 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.07■□□□□ 0.96
NME8Q8N427 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME8Q8N427 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NME8Q8N427 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.06■□□□□ 0.96
NME8Q8N427 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.06■□□□□ 0.96
NME8Q8N427 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.06■□□□□ 0.96
NME8Q8N427 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 HOMER2P1-201ENST00000455653 964 ntBASIC21.06■□□□□ 0.96
NME8Q8N427 AC092647.4-201ENST00000457211 535 ntBASIC21.06■□□□□ 0.96
NME8Q8N427 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.06■□□□□ 0.96
NME8Q8N427 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
NME8Q8N427 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME8Q8N427 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.05■□□□□ 0.96
NME8Q8N427 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NME8Q8N427 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 TSPY21P-201ENST00000433481 731 ntBASIC21.05■□□□□ 0.96
NME8Q8N427 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.05■□□□□ 0.96
NME8Q8N427 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.05■□□□□ 0.96
NME8Q8N427 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.05■□□□□ 0.96
NME8Q8N427 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.05■□□□□ 0.96
NME8Q8N427 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.05■□□□□ 0.96
NME8Q8N427 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
NME8Q8N427 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NME8Q8N427 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
NME8Q8N427 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NME8Q8N427 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NME8Q8N427 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME8Q8N427 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
NME8Q8N427 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.04■□□□□ 0.96
NME8Q8N427 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NME8Q8N427 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.04■□□□□ 0.96
NME8Q8N427 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NME8Q8N427 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms