Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AL355075.4-201ENST00000554988 638 ntBASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC020658.4-201ENST00000613987 684 ntBASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 AC004408.2-201ENST00000623613 2777 ntBASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00528Q8N1L1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC017099.1-201ENST00000448261 1028 ntBASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 TSPY15P-201ENST00000457163 923 ntBASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 AC093484.2-201ENST00000580996 2166 ntBASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00528Q8N1L1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 BX119927.1-201ENST00000636596 1552 ntBASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 AL078595.1-201ENST00000404458 226 ntBASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00528Q8N1L1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms