Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ABCA6Q8N139 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ABCA6Q8N139 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCA6Q8N139 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ABCA6Q8N139 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC28.42■■■□□ 2.14
ABCA6Q8N139 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ABCA6Q8N139 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCA6Q8N139 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ABCA6Q8N139 RNA5SP419-201ENST00000515908 135 ntBASIC28.41■■■□□ 2.14
ABCA6Q8N139 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC28.41■■■□□ 2.14
ABCA6Q8N139 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC28.41■■■□□ 2.14
ABCA6Q8N139 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
ABCA6Q8N139 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCA6Q8N139 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCA6Q8N139 AC079834.2-201ENST00000609776 1949 ntBASIC28.41■■■□□ 2.14
ABCA6Q8N139 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCA6Q8N139 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 LINC00167-201ENST00000530583 1419 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 AL023284.2-201ENST00000405850 579 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 AC074051.2-201ENST00000565115 352 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 AL121912.1-201ENST00000603683 238 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
ABCA6Q8N139 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCA6Q8N139 AL662844.1-201ENST00000546340 181 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 AL121772.3-201ENST00000610840 674 ntBASIC28.4■■■□□ 2.14
ABCA6Q8N139 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ABCA6Q8N139 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
ABCA6Q8N139 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.39■■■□□ 2.13
ABCA6Q8N139 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC28.39■■■□□ 2.13
ABCA6Q8N139 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ABCA6Q8N139 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC28.39■■■□□ 2.13
ABCA6Q8N139 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCA6Q8N139 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AL691432.2-201ENST00000607222 2038 ntBASIC28.38■■■□□ 2.13
ABCA6Q8N139 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC28.38■■■□□ 2.13
ABCA6Q8N139 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCA6Q8N139 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCA6Q8N139 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ABCA6Q8N139 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC28.37■■■□□ 2.13
ABCA6Q8N139 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ABCA6Q8N139 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
ABCA6Q8N139 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC28.37■■■□□ 2.13
ABCA6Q8N139 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ABCA6Q8N139 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
ABCA6Q8N139 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ABCA6Q8N139 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ABCA6Q8N139 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCA6Q8N139 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ABCA6Q8N139 AC104819.1-201ENST00000504587 486 ntBASIC28.36■■■□□ 2.13
ABCA6Q8N139 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 PENK-208ENST00000523051 772 ntTSL 5 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 NAA38-203ENST00000575071 553 ntTSL 2 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCA6Q8N139 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ABCA6Q8N139 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 GOLGA6L5P-202ENST00000515341 1828 ntBASIC28.36■■■□□ 2.13
ABCA6Q8N139 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ABCA6Q8N139 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 VPS51-217ENST00000639871 243 ntTSL 5 BASIC28.36■■■□□ 2.13
ABCA6Q8N139 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCA6Q8N139 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms