Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 CR769767.2-201ENST00000622735 460 ntBASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS3Q8IXF0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 AC104417.2-201ENST00000562989 1793 ntBASIC19.83■□□□□ 0.76
NPAS3Q8IXF0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 TPM4P1-201ENST00000436100 807 ntBASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 SPDYE13P-201ENST00000445314 798 ntBASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS3Q8IXF0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS3Q8IXF0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS3Q8IXF0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms