Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 AC091390.4-202ENST00000476426 537 ntBASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 AP005242.2-201ENST00000580065 1175 ntBASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 LINC01568-207ENST00000641790 1380 ntBASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 AC097493.4-201ENST00000641197 219 ntBASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM48Q8IWZ4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM48Q8IWZ4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM48Q8IWZ4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms