Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 AC091799.1-201ENST00000422823 811 ntBASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 AC010141.2-201ENST00000452426 721 ntBASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD2Q8IV50 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 AL162741.1-201ENST00000565563 1558 ntBASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 AL355001.2-201ENST00000620617 1191 ntBASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSMD2Q8IV50 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 RASA4CP-201ENST00000424092 1398 ntBASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 ANO7L1-203ENST00000602586 1720 ntBASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 AP001330.3-201ENST00000520123 633 ntBASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD2Q8IV50 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD2Q8IV50 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms