Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 C1QL1P1-201ENST00000568105 661 ntBASIC17.71■□□□□ 0.43
VRK2Q86Y07 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 HLA-A-209ENST00000638375 975 ntBASIC17.71■□□□□ 0.43
VRK2Q86Y07 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 AL023875.1-201ENST00000640777 796 ntBASIC17.71■□□□□ 0.43
VRK2Q86Y07 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.71■□□□□ 0.43
VRK2Q86Y07 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VRK2Q86Y07 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
VRK2Q86Y07 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
VRK2Q86Y07 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.7■□□□□ 0.42
VRK2Q86Y07 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 AC004264.1-201ENST00000608354 794 ntBASIC17.7■□□□□ 0.42
VRK2Q86Y07 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.7■□□□□ 0.42
VRK2Q86Y07 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VRK2Q86Y07 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ESRRAP1-201ENST00000400596 1257 ntBASIC17.69■□□□□ 0.42
VRK2Q86Y07 KRASP1-201ENST00000407852 552 ntBASIC17.69■□□□□ 0.42
VRK2Q86Y07 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
VRK2Q86Y07 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VRK2Q86Y07 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 FEM1AP3-201ENST00000403722 1741 ntBASIC17.68■□□□□ 0.42
VRK2Q86Y07 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VRK2Q86Y07 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
VRK2Q86Y07 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms