Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 AC007322.3-201ENST00000426526 701 ntBASIC20.04■□□□□ 0.8
ALYREFQ86V81 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 AC011484.1-201ENST00000377652 1995 ntBASIC20.04■□□□□ 0.8
ALYREFQ86V81 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ALYREFQ86V81 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALYREFQ86V81 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 HMGA1P5-201ENST00000412453 271 ntBASIC20.03■□□□□ 0.8
ALYREFQ86V81 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 AL121829.2-201ENST00000620908 328 ntBASIC20.03■□□□□ 0.8
ALYREFQ86V81 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALYREFQ86V81 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 BX323043.1-201ENST00000641006 1765 ntBASIC20.03■□□□□ 0.8
ALYREFQ86V81 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
ALYREFQ86V81 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALYREFQ86V81 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 MIR3652-201ENST00000579335 131 ntBASIC20.02■□□□□ 0.8
ALYREFQ86V81 AC130371.2-201ENST00000619443 611 ntBASIC20.02■□□□□ 0.8
ALYREFQ86V81 AC011558.1-201ENST00000623459 338 ntBASIC20.02■□□□□ 0.8
ALYREFQ86V81 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.02■□□□□ 0.8
ALYREFQ86V81 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALYREFQ86V81 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALYREFQ86V81 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALYREFQ86V81 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 AC092720.2-201ENST00000602388 1665 ntBASIC20.01■□□□□ 0.79
ALYREFQ86V81 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 MESTP1-201ENST00000404287 994 ntBASIC20.01■□□□□ 0.79
ALYREFQ86V81 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 ATP5G2P1-201ENST00000433580 426 ntBASIC20.01■□□□□ 0.79
ALYREFQ86V81 UNC93B7-201ENST00000509439 705 ntBASIC20.01■□□□□ 0.79
ALYREFQ86V81 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 AP000974.1-201ENST00000623909 2387 ntBASIC20.01■□□□□ 0.79
ALYREFQ86V81 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALYREFQ86V81 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALYREFQ86V81 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ALYREFQ86V81 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ALYREFQ86V81 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALYREFQ86V81 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms