Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD4Q6ZW05 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 BX276092.2-201ENST00000417668 665 ntBASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AC026185.1-201ENST00000445748 174 ntBASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AL137784.2-201ENST00000607332 1000 ntBASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD4Q6ZW05 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 CROCCP5-201ENST00000436658 830 ntBASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD4Q6ZW05 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 AC018553.1-201ENST00000616682 1458 ntBASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 AL031598.1-201ENST00000561511 1773 ntBASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTCHD4Q6ZW05 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 Z98044.1-201ENST00000632503 1764 ntBASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms