Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 AC110285.5-201ENST00000611501 352 ntBASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 CROCCP3-202ENST00000420820 1947 ntBASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF549Q6P9A3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19■□□□□ 0.63
ZNF549Q6P9A3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF549Q6P9A3 AIRN-201ENST00000601203 4374 ntBASIC19■□□□□ 0.63
ZNF549Q6P9A3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19■□□□□ 0.63
ZNF549Q6P9A3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 KRT8P41-201ENST00000533985 1514 ntBASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF549Q6P9A3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 C1QBPP2-201ENST00000528754 825 ntBASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF549Q6P9A3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms