Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF544Q6NX49 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 Z82202.1-201ENST00000623446 1880 ntBASIC17.56■□□□□ 0.4
ZNF544Q6NX49 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.56■□□□□ 0.4
ZNF544Q6NX49 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 AP003097.1-201ENST00000530657 1135 ntBASIC17.56■□□□□ 0.4
ZNF544Q6NX49 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZNF544Q6NX49 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 KRT16P6-202ENST00000425692 1426 ntBASIC17.55■□□□□ 0.4
ZNF544Q6NX49 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF544Q6NX49 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 PRORSD1P-201ENST00000295112 541 ntBASIC17.54■□□□□ 0.4
ZNF544Q6NX49 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 AC006058.3-201ENST00000606217 1069 ntBASIC17.54■□□□□ 0.4
ZNF544Q6NX49 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF544Q6NX49 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms