Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.62■□□□□ 0.57
RIF1Q5UIP0 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 PHGDH-210ENST00000641115 1638 ntBASIC18.61■□□□□ 0.57
RIF1Q5UIP0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 DNAJB3-201ENST00000446806 729 ntBASIC18.61■□□□□ 0.57
RIF1Q5UIP0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIF1Q5UIP0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 AC004832.2-201ENST00000426397 482 ntBASIC18.6■□□□□ 0.57
RIF1Q5UIP0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.6■□□□□ 0.57
RIF1Q5UIP0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.6■□□□□ 0.57
RIF1Q5UIP0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.59■□□□□ 0.57
RIF1Q5UIP0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.59■□□□□ 0.57
RIF1Q5UIP0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 RFPL4AP1-201ENST00000530883 850 ntBASIC18.59■□□□□ 0.57
RIF1Q5UIP0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.59■□□□□ 0.57
RIF1Q5UIP0 MIR7706-201ENST00000613747 67 ntBASIC18.59■□□□□ 0.57
RIF1Q5UIP0 AC079602.3-201ENST00000623931 403 ntBASIC18.59■□□□□ 0.57
RIF1Q5UIP0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 AC091607.1-201ENST00000490318 1060 ntBASIC18.58■□□□□ 0.57
RIF1Q5UIP0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RIF1Q5UIP0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 AP005901.3-202ENST00000581653 237 ntBASIC18.58■□□□□ 0.56
RIF1Q5UIP0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
RIF1Q5UIP0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms