Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC104581.1-202ENST00000635932 2618 ntBASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 AC008403.3-201ENST00000598924 454 ntBASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 AC079598.2-202ENST00000546624 1451 ntBASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF1Q5TC12 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 AC009113.1-201ENST00000570267 2443 ntBASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 AP003097.1-201ENST00000530657 1135 ntBASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF1Q5TC12 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.58■□□□□ 0.25
ATPAF1Q5TC12 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 POM121L13P-201ENST00000422362 380 ntBASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 RPS2P52-201ENST00000469610 820 ntBASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms