Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC39AQ5SRH9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 ECEL1P2-202ENST00000465689 757 ntBASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TTC39AQ5SRH9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 AC128688.1-201ENST00000487626 519 ntBASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 AC005363.2-201ENST00000618631 242 ntBASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC39AQ5SRH9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 SLC25A1P2-201ENST00000430693 912 ntBASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 CCR12P-201ENST00000446203 998 ntBASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 KRT18P21-201ENST00000515767 1272 ntBASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 AC116562.4-202ENST00000641738 218 ntBASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.3■■□□□ 1.32
TTC39AQ5SRH9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.29■■□□□ 1.32
TTC39AQ5SRH9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 SLC25A3P1-201ENST00000443844 931 ntBASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TTC39AQ5SRH9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TTC39AQ5SRH9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms