Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC090616.6-201ENST00000582640 721 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 AL136038.4-201ENST00000603606 1261 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 AC112497.1-201ENST00000624824 639 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRK2Q5S007 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRK2Q5S007 AL391807.1-203ENST00000604392 2365 ntBASIC16.64■□□□□ 0.25
LRRK2Q5S007 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 AC106730.1-201ENST00000566722 1090 ntBASIC16.63■□□□□ 0.25
LRRK2Q5S007 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 DPP3P2-201ENST00000416030 1696 ntBASIC16.63■□□□□ 0.25
LRRK2Q5S007 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRK2Q5S007 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRRK2Q5S007 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 AC093909.1-201ENST00000504731 1122 ntBASIC16.62■□□□□ 0.25
LRRK2Q5S007 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRK2Q5S007 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRK2Q5S007 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 AL390719.2-201ENST00000606993 987 ntBASIC16.61■□□□□ 0.25
LRRK2Q5S007 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 NSUN5P1-202ENST00000421140 1535 ntBASIC16.61■□□□□ 0.25
LRRK2Q5S007 NSUN5P2-203ENST00000457352 1529 ntBASIC16.61■□□□□ 0.25
LRRK2Q5S007 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 AC145285.3-201ENST00000564603 959 ntBASIC16.61■□□□□ 0.25
LRRK2Q5S007 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 MIR7706-201ENST00000613747 67 ntBASIC16.61■□□□□ 0.25
LRRK2Q5S007 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRK2Q5S007 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRK2Q5S007 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRK2Q5S007 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRK2Q5S007 UPF3AP3-201ENST00000420996 769 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms