Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SGO1Q5FBB7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 PRKY-204ENST00000533551 1019 ntBASIC18.6■□□□□ 0.57
SGO1Q5FBB7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 AC008403.3-201ENST00000598924 454 ntBASIC18.6■□□□□ 0.57
SGO1Q5FBB7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.6■□□□□ 0.57
SGO1Q5FBB7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SGO1Q5FBB7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SGO1Q5FBB7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.58■□□□□ 0.57
SGO1Q5FBB7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
SGO1Q5FBB7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms