Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 C1QBPP2-201ENST00000528754 825 ntBASIC18.7■□□□□ 0.58
SFT2D3Q587I9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 RN7SL471P-201ENST00000580476 299 ntBASIC18.7■□□□□ 0.58
SFT2D3Q587I9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFT2D3Q587I9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 KRT8P17-201ENST00000453110 1448 ntBASIC18.69■□□□□ 0.58
SFT2D3Q587I9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 AC066615.1-201ENST00000640911 628 ntBASIC18.69■□□□□ 0.58
SFT2D3Q587I9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFT2D3Q587I9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFT2D3Q587I9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.67■□□□□ 0.58
SFT2D3Q587I9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms