Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.98■□□□□ 0.95
UBXN1Q04323 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBXN1Q04323 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.98■□□□□ 0.95
UBXN1Q04323 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.98■□□□□ 0.95
UBXN1Q04323 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.98■□□□□ 0.95
UBXN1Q04323 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.98■□□□□ 0.95
UBXN1Q04323 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBXN1Q04323 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBXN1Q04323 WIZP1-201ENST00000531444 2299 ntBASIC20.98■□□□□ 0.95
UBXN1Q04323 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
UBXN1Q04323 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.98■□□□□ 0.95
UBXN1Q04323 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBXN1Q04323 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC007613.1-201ENST00000572811 2597 ntBASIC20.97■□□□□ 0.95
UBXN1Q04323 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.97■□□□□ 0.95
UBXN1Q04323 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.97■□□□□ 0.95
UBXN1Q04323 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
UBXN1Q04323 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.97■□□□□ 0.95
UBXN1Q04323 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AC083880.1-201ENST00000608266 535 ntBASIC20.97■□□□□ 0.95
UBXN1Q04323 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
UBXN1Q04323 AL121829.2-201ENST00000620908 328 ntBASIC20.97■□□□□ 0.95
UBXN1Q04323 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 Z98044.1-201ENST00000632503 1764 ntBASIC20.97■□□□□ 0.95
UBXN1Q04323 AC093525.10-201ENST00000625130 1569 ntBASIC20.97■□□□□ 0.95
UBXN1Q04323 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBXN1Q04323 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.97■□□□□ 0.95
UBXN1Q04323 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UBXN1Q04323 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
UBXN1Q04323 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBXN1Q04323 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
UBXN1Q04323 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.96■□□□□ 0.95
UBXN1Q04323 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 MIR935-201ENST00000401179 91 ntBASIC20.96■□□□□ 0.95
UBXN1Q04323 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UBXN1Q04323 AC098934.4-201ENST00000564127 592 ntBASIC20.96■□□□□ 0.95
UBXN1Q04323 SOX15-203ENST00000570788 1093 ntBASIC20.96■□□□□ 0.95
UBXN1Q04323 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.96■□□□□ 0.95
UBXN1Q04323 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
UBXN1Q04323 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.96■□□□□ 0.95
UBXN1Q04323 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.96■□□□□ 0.95
UBXN1Q04323 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
UBXN1Q04323 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBXN1Q04323 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
UBXN1Q04323 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 FEM1AP3-201ENST00000403722 1741 ntBASIC20.95■□□□□ 0.94
UBXN1Q04323 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBXN1Q04323 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.95■□□□□ 0.94
UBXN1Q04323 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
UBXN1Q04323 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.95■□□□□ 0.94
UBXN1Q04323 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 AL512353.2-201ENST00000448759 1962 ntBASIC20.95■□□□□ 0.94
UBXN1Q04323 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.95■□□□□ 0.94
UBXN1Q04323 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBXN1Q04323 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.95■□□□□ 0.94
UBXN1Q04323 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
UBXN1Q04323 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBXN1Q04323 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBXN1Q04323 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBXN1Q04323 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBXN1Q04323 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.94■□□□□ 0.94
UBXN1Q04323 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.94■□□□□ 0.94
UBXN1Q04323 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.94■□□□□ 0.94
UBXN1Q04323 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBXN1Q04323 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms