Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.72■□□□□ 0.91
TFAMQ00059 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TFAMQ00059 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TFAMQ00059 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TFAMQ00059 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TFAMQ00059 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TFAMQ00059 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TFAMQ00059 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TFAMQ00059 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.72■□□□□ 0.91
TFAMQ00059 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.72■□□□□ 0.91
TFAMQ00059 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TFAMQ00059 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.72■□□□□ 0.91
TFAMQ00059 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
TFAMQ00059 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.71■□□□□ 0.91
TFAMQ00059 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TFAMQ00059 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TFAMQ00059 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 AL032819.2-201ENST00000624543 2162 ntBASIC20.71■□□□□ 0.91
TFAMQ00059 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 MMP23A-201ENST00000234610 1017 ntBASIC20.71■□□□□ 0.91
TFAMQ00059 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.71■□□□□ 0.91
TFAMQ00059 FITM1-202ENST00000559294 800 ntBASIC20.71■□□□□ 0.91
TFAMQ00059 AC073912.3-201ENST00000624414 853 ntBASIC20.71■□□□□ 0.91
TFAMQ00059 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.71■□□□□ 0.91
TFAMQ00059 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 AC116562.4-201ENST00000641316 2276 ntBASIC20.71■□□□□ 0.91
TFAMQ00059 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TFAMQ00059 KRT8P11-201ENST00000409686 1436 ntBASIC20.7■□□□□ 0.9
TFAMQ00059 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TFAMQ00059 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 MFAP1P1-201ENST00000442257 1255 ntBASIC20.7■□□□□ 0.9
TFAMQ00059 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.7■□□□□ 0.9
TFAMQ00059 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.7■□□□□ 0.9
TFAMQ00059 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.7■□□□□ 0.9
TFAMQ00059 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.7■□□□□ 0.9
TFAMQ00059 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.7■□□□□ 0.9
TFAMQ00059 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TFAMQ00059 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.7■□□□□ 0.9
TFAMQ00059 KRT8P9-201ENST00000558927 1449 ntBASIC20.7■□□□□ 0.9
TFAMQ00059 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.69■□□□□ 0.9
TFAMQ00059 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TFAMQ00059 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.69■□□□□ 0.9
TFAMQ00059 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TFAMQ00059 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TFAMQ00059 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TFAMQ00059 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.68■□□□□ 0.9
TFAMQ00059 TEX21P-204ENST00000641479 1693 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.68■□□□□ 0.9
TFAMQ00059 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 AC087499.1-201ENST00000418141 1075 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 TSPY21P-201ENST00000433481 731 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 TSPY23P-201ENST00000440136 739 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TFAMQ00059 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.68■□□□□ 0.9
TFAMQ00059 AP005242.2-201ENST00000580065 1175 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TFAMQ00059 AC096733.2-201ENST00000609937 1394 ntBASIC20.68■□□□□ 0.9
TFAMQ00059 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms