Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 MIR574-201ENST00000385209 96 ntBASIC20.68■□□□□ 0.9
SMAD3P84022 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.68■□□□□ 0.9
SMAD3P84022 AP000867.3-201ENST00000524675 377 ntBASIC20.68■□□□□ 0.9
SMAD3P84022 AC012615.1-201ENST00000565797 1299 ntBASIC20.68■□□□□ 0.9
SMAD3P84022 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.68■□□□□ 0.9
SMAD3P84022 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.68■□□□□ 0.9
SMAD3P84022 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.68■□□□□ 0.9
SMAD3P84022 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.68■□□□□ 0.9
SMAD3P84022 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD3P84022 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMAD3P84022 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMAD3P84022 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMAD3P84022 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD3P84022 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SMAD3P84022 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.67■□□□□ 0.9
SMAD3P84022 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SMAD3P84022 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 TPSP2-201ENST00000561760 610 ntBASIC20.67■□□□□ 0.9
SMAD3P84022 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 AL137060.1-201ENST00000618151 2648 ntBASIC20.67■□□□□ 0.9
SMAD3P84022 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMAD3P84022 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD3P84022 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD3P84022 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SMAD3P84022 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD3P84022 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 FAM220CP-201ENST00000395253 831 ntBASIC20.66■□□□□ 0.9
SMAD3P84022 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMAD3P84022 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMAD3P84022 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.66■□□□□ 0.9
SMAD3P84022 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD3P84022 AF228730.7-201ENST00000641842 219 ntBASIC20.66■□□□□ 0.9
SMAD3P84022 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD3P84022 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 AL162741.1-201ENST00000565563 1558 ntBASIC20.66■□□□□ 0.9
SMAD3P84022 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SMAD3P84022 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
SMAD3P84022 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD3P84022 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.65■□□□□ 0.9
SMAD3P84022 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD3P84022 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD3P84022 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 LINC00265-3P-201ENST00000447588 903 ntBASIC20.65■□□□□ 0.9
SMAD3P84022 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.65■□□□□ 0.9
SMAD3P84022 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD3P84022 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD3P84022 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD3P84022 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.64■□□□□ 0.9
SMAD3P84022 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.64■□□□□ 0.9
SMAD3P84022 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD3P84022 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SMAD3P84022 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD3P84022 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
SMAD3P84022 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD3P84022 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD3P84022 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD3P84022 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
SMAD3P84022 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD3P84022 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD3P84022 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.64■□□□□ 0.89
SMAD3P84022 MIR1233-2-201ENST00000408138 82 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms