Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCNA1P78396 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNA1P78396 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCNA1P78396 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
CCNA1P78396 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCNA1P78396 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.8■■□□□ 1.08
CCNA1P78396 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCNA1P78396 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCNA1P78396 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNA1P78396 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCNA1P78396 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNA1P78396 SPDYE13P-201ENST00000445314 798 ntBASIC21.79■■□□□ 1.08
CCNA1P78396 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CCNA1P78396 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.79■■□□□ 1.08
CCNA1P78396 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNA1P78396 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNA1P78396 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNA1P78396 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNA1P78396 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNA1P78396 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNA1P78396 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNA1P78396 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNA1P78396 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNA1P78396 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNA1P78396 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCNA1P78396 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNA1P78396 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNA1P78396 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNA1P78396 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.77■■□□□ 1.08
CCNA1P78396 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNA1P78396 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.77■■□□□ 1.08
CCNA1P78396 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
CCNA1P78396 NPAP1P7-201ENST00000613027 823 ntBASIC21.77■■□□□ 1.08
CCNA1P78396 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNA1P78396 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNA1P78396 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNA1P78396 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CCNA1P78396 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNA1P78396 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNA1P78396 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNA1P78396 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNA1P78396 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCNA1P78396 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNA1P78396 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNA1P78396 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.76■■□□□ 1.07
CCNA1P78396 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNA1P78396 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNA1P78396 AC012313.10-201ENST00000623509 926 ntBASIC21.76■■□□□ 1.07
CCNA1P78396 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNA1P78396 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNA1P78396 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNA1P78396 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCNA1P78396 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNA1P78396 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNA1P78396 AC092597.1-201ENST00000487352 616 ntBASIC21.75■■□□□ 1.07
CCNA1P78396 MIR3652-201ENST00000579335 131 ntBASIC21.75■■□□□ 1.07
CCNA1P78396 AC092329.2-201ENST00000598402 547 ntBASIC21.75■■□□□ 1.07
CCNA1P78396 AC092119.3-201ENST00000612618 583 ntBASIC21.75■■□□□ 1.07
CCNA1P78396 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms