Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.3■□□□□ 0.36
RPS4XP62701 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RPS4XP62701 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RPS4XP62701 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 PRKY-204ENST00000533551 1019 ntBASIC17.3■□□□□ 0.36
RPS4XP62701 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.3■□□□□ 0.36
RPS4XP62701 AP001412.1-201ENST00000608405 714 ntBASIC17.3■□□□□ 0.36
RPS4XP62701 AC124016.1-201ENST00000609552 612 ntBASIC17.3■□□□□ 0.36
RPS4XP62701 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.3■□□□□ 0.36
RPS4XP62701 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RPS4XP62701 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS4XP62701 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RPS4XP62701 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS4XP62701 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPS4XP62701 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RPS4XP62701 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.29■□□□□ 0.36
RPS4XP62701 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.29■□□□□ 0.36
RPS4XP62701 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 AC133681.1-201ENST00000465482 601 ntBASIC17.29■□□□□ 0.36
RPS4XP62701 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.29■□□□□ 0.36
RPS4XP62701 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RPS4XP62701 C1QL1P1-201ENST00000568105 661 ntBASIC17.29■□□□□ 0.36
RPS4XP62701 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 AC233702.5-201ENST00000584107 538 ntBASIC17.29■□□□□ 0.36
RPS4XP62701 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPS4XP62701 AL135905.2-201ENST00000584934 1404 ntBASIC17.29■□□□□ 0.36
RPS4XP62701 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4XP62701 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RPS4XP62701 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.28■□□□□ 0.36
RPS4XP62701 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
RPS4XP62701 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RPS4XP62701 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RPS4XP62701 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RPS4XP62701 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4XP62701 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.28■□□□□ 0.36
RPS4XP62701 RPS2P55-201ENST00000397318 883 ntBASIC17.28■□□□□ 0.36
RPS4XP62701 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 AC107956.1-201ENST00000494359 873 ntBASIC17.28■□□□□ 0.36
RPS4XP62701 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4XP62701 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4XP62701 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4XP62701 AC110285.5-201ENST00000611501 352 ntBASIC17.28■□□□□ 0.36
RPS4XP62701 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 NBPF21P-201ENST00000425093 1451 ntBASIC17.28■□□□□ 0.36
RPS4XP62701 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RPS4XP62701 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4XP62701 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms