Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3S2P59780 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.45■□□□□ 0.22
AP3S2P59780 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.45■□□□□ 0.22
AP3S2P59780 SLC7A5P1-201ENST00000568957 537 ntBASIC16.45■□□□□ 0.22
AP3S2P59780 AL136162.1-201ENST00000607711 1078 ntBASIC16.45■□□□□ 0.22
AP3S2P59780 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP3S2P59780 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S2P59780 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S2P59780 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
AP3S2P59780 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
AP3S2P59780 AC135279.3-201ENST00000610945 1311 ntBASIC16.45■□□□□ 0.22
AP3S2P59780 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 CYP21A1P-202ENST00000354927 1481 ntBASIC16.44■□□□□ 0.22
AP3S2P59780 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
AP3S2P59780 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3S2P59780 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3S2P59780 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S2P59780 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3S2P59780 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP3S2P59780 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3S2P59780 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3S2P59780 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 AL162741.1-201ENST00000565563 1558 ntBASIC16.43■□□□□ 0.22
AP3S2P59780 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
AP3S2P59780 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 ZNF815P-204ENST00000434898 1737 ntBASIC16.43■□□□□ 0.22
AP3S2P59780 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3S2P59780 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 AC131281.2-201ENST00000520478 145 ntBASIC16.43■□□□□ 0.22
AP3S2P59780 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3S2P59780 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.43■□□□□ 0.22
AP3S2P59780 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3S2P59780 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3S2P59780 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3S2P59780 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms