Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA1P59665 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DEFA1P59665 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.82■□□□□ 0.28
DEFA1P59665 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
DEFA1P59665 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
DEFA1P59665 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA1P59665 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DEFA1P59665 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.82■□□□□ 0.28
DEFA1P59665 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.82■□□□□ 0.28
DEFA1P59665 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA1P59665 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA1P59665 AC053503.5-201ENST00000601508 636 ntBASIC16.82■□□□□ 0.28
DEFA1P59665 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DEFA1P59665 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
DEFA1P59665 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DEFA1P59665 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA1P59665 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.82■□□□□ 0.28
DEFA1P59665 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DEFA1P59665 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
DEFA1P59665 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
DEFA1P59665 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA1P59665 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA1P59665 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DEFA1P59665 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.81■□□□□ 0.28
DEFA1P59665 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.81■□□□□ 0.28
DEFA1P59665 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.81■□□□□ 0.28
DEFA1P59665 AL033527.3-201ENST00000566366 1196 ntBASIC16.81■□□□□ 0.28
DEFA1P59665 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DEFA1P59665 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.81■□□□□ 0.28
DEFA1P59665 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 SYT6-210ENST00000641643 1587 ntBASIC16.81■□□□□ 0.28
DEFA1P59665 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DEFA1P59665 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DEFA1P59665 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA1P59665 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DEFA1P59665 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA1P59665 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DEFA1P59665 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.8■□□□□ 0.28
DEFA1P59665 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
DEFA1P59665 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA1P59665 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
DEFA1P59665 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DEFA1P59665 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.8■□□□□ 0.28
DEFA1P59665 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DEFA1P59665 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms