Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM11AP58511 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM11AP58511 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SMIM11AP58511 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.65■□□□□ 0.42
SMIM11AP58511 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.65■□□□□ 0.42
SMIM11AP58511 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.65■□□□□ 0.42
SMIM11AP58511 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.65■□□□□ 0.42
SMIM11AP58511 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.65■□□□□ 0.42
SMIM11AP58511 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.65■□□□□ 0.42
SMIM11AP58511 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM11AP58511 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM11AP58511 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.64■□□□□ 0.42
SMIM11AP58511 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMIM11AP58511 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMIM11AP58511 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.64■□□□□ 0.42
SMIM11AP58511 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SMIM11AP58511 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 WIZP1-201ENST00000531444 2299 ntBASIC17.64■□□□□ 0.41
SMIM11AP58511 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMIM11AP58511 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM11AP58511 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM11AP58511 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM11AP58511 RARRES2P6-201ENST00000567333 442 ntBASIC17.64■□□□□ 0.41
SMIM11AP58511 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 AC006557.6-201ENST00000623071 864 ntBASIC17.64■□□□□ 0.41
SMIM11AP58511 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM11AP58511 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM11AP58511 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM11AP58511 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.63■□□□□ 0.41
SMIM11AP58511 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AL162430.1-201ENST00000480705 870 ntBASIC17.63■□□□□ 0.41
SMIM11AP58511 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.63■□□□□ 0.41
SMIM11AP58511 AC080038.1-201ENST00000611274 1154 ntBASIC17.63■□□□□ 0.41
SMIM11AP58511 MIR5787-201ENST00000611784 55 ntBASIC17.63■□□□□ 0.41
SMIM11AP58511 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
SMIM11AP58511 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM11AP58511 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMIM11AP58511 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms