Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FOXG1P55316 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 INGX-201ENST00000359239 846 ntBASIC16.81■□□□□ 0.28
FOXG1P55316 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.81■□□□□ 0.28
FOXG1P55316 CKBP1-201ENST00000565489 1086 ntBASIC16.81■□□□□ 0.28
FOXG1P55316 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXG1P55316 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXG1P55316 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXG1P55316 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXG1P55316 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FOXG1P55316 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXG1P55316 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 AC005332.7-201ENST00000614046 2005 ntBASIC16.8■□□□□ 0.28
FOXG1P55316 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXG1P55316 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXG1P55316 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
FOXG1P55316 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
FOXG1P55316 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXG1P55316 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXG1P55316 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXG1P55316 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXG1P55316 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
FOXG1P55316 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXG1P55316 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXG1P55316 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXG1P55316 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXG1P55316 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXG1P55316 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXG1P55316 AC012306.2-201ENST00000609350 630 ntBASIC16.79■□□□□ 0.28
FOXG1P55316 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXG1P55316 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXG1P55316 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXG1P55316 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXG1P55316 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXG1P55316 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FOXG1P55316 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXG1P55316 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXG1P55316 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXG1P55316 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXG1P55316 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXG1P55316 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXG1P55316 NAPSB-206ENST00000562112 1266 ntBASIC16.78■□□□□ 0.28
FOXG1P55316 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
FOXG1P55316 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXG1P55316 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXG1P55316 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXG1P55316 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms