Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDH4P55283 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.6■□□□□ 0.73
CDH4P55283 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH4P55283 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 LINC01568-207ENST00000641790 1380 ntBASIC19.59■□□□□ 0.73
CDH4P55283 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 SLC25A1P2-201ENST00000430693 912 ntBASIC19.59■□□□□ 0.73
CDH4P55283 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH4P55283 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH4P55283 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH4P55283 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH4P55283 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CDH4P55283 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
CDH4P55283 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH4P55283 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDH4P55283 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.58■□□□□ 0.72
CDH4P55283 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH4P55283 ECEL1P3-201ENST00000427961 737 ntBASIC19.58■□□□□ 0.72
CDH4P55283 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH4P55283 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH4P55283 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.58■□□□□ 0.72
CDH4P55283 AL032819.2-201ENST00000624543 2162 ntBASIC19.58■□□□□ 0.72
CDH4P55283 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH4P55283 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH4P55283 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH4P55283 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH4P55283 AC141586.3-201ENST00000562166 1838 ntBASIC19.58■□□□□ 0.72
CDH4P55283 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 AC007952.6-201ENST00000573168 2673 ntBASIC19.57■□□□□ 0.72
CDH4P55283 AC003957.1-201ENST00000625108 2673 ntBASIC19.57■□□□□ 0.72
CDH4P55283 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 CCR12P-201ENST00000446203 998 ntBASIC19.57■□□□□ 0.72
CDH4P55283 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.57■□□□□ 0.72
CDH4P55283 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDH4P55283 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH4P55283 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH4P55283 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH4P55283 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH4P55283 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CDH4P55283 KRT18P22-201ENST00000402024 1347 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms