Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
COPAP53621 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COPAP53621 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPAP53621 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.74■□□□□ 0.75
COPAP53621 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COPAP53621 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPAP53621 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPAP53621 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPAP53621 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPAP53621 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COPAP53621 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.73■□□□□ 0.75
COPAP53621 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COPAP53621 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.73■□□□□ 0.75
COPAP53621 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.73■□□□□ 0.75
COPAP53621 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.73■□□□□ 0.75
COPAP53621 DGCR10-201ENST00000609839 495 ntBASIC19.73■□□□□ 0.75
COPAP53621 AC131212.4-201ENST00000623606 975 ntBASIC19.73■□□□□ 0.75
COPAP53621 HLA-A-209ENST00000638375 975 ntBASIC19.73■□□□□ 0.75
COPAP53621 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.73■□□□□ 0.75
COPAP53621 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 KRT18P22-201ENST00000402024 1347 ntBASIC19.73■□□□□ 0.75
COPAP53621 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPAP53621 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
COPAP53621 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
COPAP53621 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COPAP53621 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.72■□□□□ 0.75
COPAP53621 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.72■□□□□ 0.75
COPAP53621 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.72■□□□□ 0.75
COPAP53621 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.72■□□□□ 0.75
COPAP53621 AP005242.2-201ENST00000580065 1175 ntBASIC19.72■□□□□ 0.75
COPAP53621 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.72■□□□□ 0.75
COPAP53621 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.72■□□□□ 0.75
COPAP53621 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.72■□□□□ 0.75
COPAP53621 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.72■□□□□ 0.75
COPAP53621 TMEM179-206ENST00000616017 1645 ntBASIC19.72■□□□□ 0.75
COPAP53621 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COPAP53621 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
COPAP53621 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.72■□□□□ 0.75
COPAP53621 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPAP53621 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COPAP53621 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.71■□□□□ 0.75
COPAP53621 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.71■□□□□ 0.75
COPAP53621 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.71■□□□□ 0.75
COPAP53621 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPAP53621 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COPAP53621 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COPAP53621 AC073508.3-201ENST00000619697 1419 ntBASIC19.7■□□□□ 0.74
COPAP53621 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
COPAP53621 AC004408.2-201ENST00000623613 2777 ntBASIC19.7■□□□□ 0.74
COPAP53621 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 TERF1P1-201ENST00000311003 1181 ntBASIC19.7■□□□□ 0.74
COPAP53621 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
COPAP53621 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms