Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF140P52738 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF140P52738 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF140P52738 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.09■□□□□ 0.65
ZNF140P52738 MIR6786-201ENST00000616843 113 ntBASIC19.09■□□□□ 0.65
ZNF140P52738 AC011298.2-201ENST00000617989 482 ntBASIC19.09■□□□□ 0.65
ZNF140P52738 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF140P52738 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF140P52738 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF140P52738 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF140P52738 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.08■□□□□ 0.65
ZNF140P52738 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ZNF140P52738 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.08■□□□□ 0.65
ZNF140P52738 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF140P52738 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF140P52738 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF140P52738 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF140P52738 AP001412.1-201ENST00000608405 714 ntBASIC19.08■□□□□ 0.64
ZNF140P52738 AC130371.2-201ENST00000619443 611 ntBASIC19.08■□□□□ 0.64
ZNF140P52738 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ZNF140P52738 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF140P52738 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF140P52738 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF140P52738 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF140P52738 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF140P52738 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF140P52738 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF140P52738 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
ZNF140P52738 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF140P52738 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF140P52738 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF140P52738 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF140P52738 TNXA-203ENST00000507684 2038 ntBASIC19.07■□□□□ 0.64
ZNF140P52738 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF140P52738 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
ZNF140P52738 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF140P52738 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 AC116562.2-201ENST00000507042 360 ntBASIC19.06■□□□□ 0.64
ZNF140P52738 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 PRSS44-201ENST00000515154 1146 ntBASIC19.06■□□□□ 0.64
ZNF140P52738 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF140P52738 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF140P52738 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF140P52738 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF140P52738 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms