Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLCN4P51793 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN4P51793 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN4P51793 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN4P51793 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLCN4P51793 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.16■□□□□ 0.82
CLCN4P51793 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCN4P51793 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CLCN4P51793 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN4P51793 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCN4P51793 CLEC4GP1-201ENST00000596555 870 ntBASIC20.16■□□□□ 0.82
CLCN4P51793 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CLCN4P51793 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN4P51793 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN4P51793 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLCN4P51793 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.15■□□□□ 0.82
CLCN4P51793 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN4P51793 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN4P51793 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN4P51793 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.15■□□□□ 0.82
CLCN4P51793 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.15■□□□□ 0.82
CLCN4P51793 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN4P51793 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCN4P51793 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN4P51793 AL391422.3-201ENST00000603791 2761 ntBASIC20.15■□□□□ 0.82
CLCN4P51793 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLCN4P51793 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CLCN4P51793 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CLCN4P51793 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 TPM4P1-201ENST00000436100 807 ntBASIC20.14■□□□□ 0.81
CLCN4P51793 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 CR769767.2-201ENST00000622735 460 ntBASIC20.14■□□□□ 0.81
CLCN4P51793 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLCN4P51793 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN4P51793 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN4P51793 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 AC104417.2-201ENST00000562989 1793 ntBASIC20.13■□□□□ 0.81
CLCN4P51793 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 SPDYE13P-201ENST00000445314 798 ntBASIC20.13■□□□□ 0.81
CLCN4P51793 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCN4P51793 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCN4P51793 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.13■□□□□ 0.81
CLCN4P51793 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN4P51793 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN4P51793 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN4P51793 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCN4P51793 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN4P51793 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN4P51793 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN4P51793 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms