Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
PDE6CP51160 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6CP51160 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE6CP51160 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PDE6CP51160 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PDE6CP51160 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.68■□□□□ 0.9
PDE6CP51160 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE6CP51160 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE6CP51160 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PDE6CP51160 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6CP51160 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE6CP51160 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6CP51160 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE6CP51160 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDE6CP51160 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.67■□□□□ 0.9
PDE6CP51160 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PDE6CP51160 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6CP51160 AC073195.1-201ENST00000607241 877 ntBASIC20.67■□□□□ 0.9
PDE6CP51160 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.67■□□□□ 0.9
PDE6CP51160 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PDE6CP51160 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE6CP51160 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.67■□□□□ 0.9
PDE6CP51160 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE6CP51160 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDE6CP51160 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PDE6CP51160 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 TEX21P-204ENST00000641479 1693 ntBASIC20.67■□□□□ 0.9
PDE6CP51160 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6CP51160 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PDE6CP51160 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE6CP51160 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 AP002982.1-201ENST00000492365 877 ntBASIC20.66■□□□□ 0.9
PDE6CP51160 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PDE6CP51160 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6CP51160 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.66■□□□□ 0.9
PDE6CP51160 AL353708.3-201ENST00000610272 989 ntBASIC20.66■□□□□ 0.9
PDE6CP51160 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE6CP51160 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDE6CP51160 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE6CP51160 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6CP51160 SDHAP1-207ENST00000440850 2000 ntBASIC20.66■□□□□ 0.9
PDE6CP51160 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6CP51160 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6CP51160 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6CP51160 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PDE6CP51160 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6CP51160 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PDE6CP51160 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE6CP51160 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6CP51160 AC141586.3-201ENST00000562166 1838 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms