Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 AL645929.1-201ENST00000420084 975 ntBASIC21.16■□□□□ 0.98
CDK7P50613 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDK7P50613 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.16■□□□□ 0.98
CDK7P50613 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CDK7P50613 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 AC092329.2-201ENST00000598402 547 ntBASIC21.16■□□□□ 0.98
CDK7P50613 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK7P50613 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDK7P50613 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK7P50613 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDK7P50613 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.15■□□□□ 0.98
CDK7P50613 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDK7P50613 RASA4DP-201ENST00000460726 1199 ntBASIC21.15■□□□□ 0.98
CDK7P50613 MIR3180-1-201ENST00000580374 94 ntBASIC21.15■□□□□ 0.98
CDK7P50613 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.15■□□□□ 0.98
CDK7P50613 MIR3180-3-201ENST00000584616 94 ntBASIC21.15■□□□□ 0.98
CDK7P50613 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK7P50613 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDK7P50613 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDK7P50613 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK7P50613 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK7P50613 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDK7P50613 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDK7P50613 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDK7P50613 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDK7P50613 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDK7P50613 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.14■□□□□ 0.97
CDK7P50613 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDK7P50613 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.14■□□□□ 0.97
CDK7P50613 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDK7P50613 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
CDK7P50613 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.13■□□□□ 0.97
CDK7P50613 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 AC016734.2-201ENST00000624325 1377 ntBASIC21.13■□□□□ 0.97
CDK7P50613 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDK7P50613 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.13■□□□□ 0.97
CDK7P50613 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDK7P50613 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK7P50613 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
CDK7P50613 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDK7P50613 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK7P50613 AC009237.14-201ENST00000609975 1594 ntBASIC21.12■□□□□ 0.97
CDK7P50613 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDK7P50613 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 TSSC2-201ENST00000450217 709 ntBASIC21.12■□□□□ 0.97
CDK7P50613 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK7P50613 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK7P50613 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK7P50613 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK7P50613 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK7P50613 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CDK7P50613 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK7P50613 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms