Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPT1AP50416 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.24■□□□□ 0.99
CPT1AP50416 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPT1AP50416 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.24■□□□□ 0.99
CPT1AP50416 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.24■□□□□ 0.99
CPT1AP50416 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPT1AP50416 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPT1AP50416 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPT1AP50416 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CPT1AP50416 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 AL450487.1-201ENST00000426799 995 ntBASIC21.23■□□□□ 0.99
CPT1AP50416 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.23■□□□□ 0.99
CPT1AP50416 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.23■□□□□ 0.99
CPT1AP50416 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.23■□□□□ 0.99
CPT1AP50416 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.23■□□□□ 0.99
CPT1AP50416 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.23■□□□□ 0.99
CPT1AP50416 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.23■□□□□ 0.99
CPT1AP50416 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CPT1AP50416 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPT1AP50416 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.23■□□□□ 0.99
CPT1AP50416 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CPT1AP50416 RASA4DP-201ENST00000460726 1199 ntBASIC21.22■□□□□ 0.99
CPT1AP50416 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.22■□□□□ 0.99
CPT1AP50416 AL121894.2-201ENST00000602977 491 ntBASIC21.22■□□□□ 0.99
CPT1AP50416 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 AC092667.1-201ENST00000434301 2586 ntBASIC21.22■□□□□ 0.99
CPT1AP50416 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPT1AP50416 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.22■□□□□ 0.99
CPT1AP50416 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.21■□□□□ 0.99
CPT1AP50416 TCF3P1-201ENST00000423021 1937 ntBASIC21.21■□□□□ 0.99
CPT1AP50416 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 GPAT2P1-201ENST00000444924 1672 ntBASIC21.21■□□□□ 0.99
CPT1AP50416 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.21■□□□□ 0.99
CPT1AP50416 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 SDHAP1-207ENST00000440850 2000 ntBASIC21.21■□□□□ 0.99
CPT1AP50416 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPT1AP50416 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 HBZP1-201ENST00000354915 429 ntBASIC21.21■□□□□ 0.99
CPT1AP50416 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.21■□□□□ 0.99
CPT1AP50416 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.21■□□□□ 0.99
CPT1AP50416 CLEC4GP1-201ENST00000596555 870 ntBASIC21.21■□□□□ 0.99
CPT1AP50416 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.21■□□□□ 0.99
CPT1AP50416 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.21■□□□□ 0.99
CPT1AP50416 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPT1AP50416 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
CPT1AP50416 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.2■□□□□ 0.98
CPT1AP50416 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 ATP5G2P1-201ENST00000433580 426 ntBASIC21.2■□□□□ 0.98
CPT1AP50416 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.2■□□□□ 0.98
CPT1AP50416 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.2■□□□□ 0.98
CPT1AP50416 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CPT1AP50416 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.2■□□□□ 0.98
CPT1AP50416 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.2■□□□□ 0.98
CPT1AP50416 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.2■□□□□ 0.98
CPT1AP50416 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.2■□□□□ 0.98
CPT1AP50416 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CPT1AP50416 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPT1AP50416 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms