Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.18■□□□□ 0.5
GABRA4P48169 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.18■□□□□ 0.5
GABRA4P48169 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GABRA4P48169 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GABRA4P48169 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.18■□□□□ 0.5
GABRA4P48169 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.18■□□□□ 0.5
GABRA4P48169 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.18■□□□□ 0.5
GABRA4P48169 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GABRA4P48169 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 TEX21P-204ENST00000641479 1693 ntBASIC18.18■□□□□ 0.5
GABRA4P48169 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.18■□□□□ 0.5
GABRA4P48169 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GABRA4P48169 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.17■□□□□ 0.5
GABRA4P48169 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.17■□□□□ 0.5
GABRA4P48169 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GABRA4P48169 AL138966.2-201ENST00000621997 464 ntBASIC18.17■□□□□ 0.5
GABRA4P48169 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.17■□□□□ 0.5
GABRA4P48169 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
GABRA4P48169 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GABRA4P48169 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GABRA4P48169 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.16■□□□□ 0.5
GABRA4P48169 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.16■□□□□ 0.5
GABRA4P48169 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 MIR1224-201ENST00000408193 85 ntBASIC18.16■□□□□ 0.5
GABRA4P48169 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.16■□□□□ 0.5
GABRA4P48169 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 AP003041.3-201ENST00000527151 707 ntBASIC18.16■□□□□ 0.5
GABRA4P48169 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.16■□□□□ 0.5
GABRA4P48169 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.16■□□□□ 0.5
GABRA4P48169 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GABRA4P48169 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GABRA4P48169 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.16■□□□□ 0.5
GABRA4P48169 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.16■□□□□ 0.5
GABRA4P48169 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.15■□□□□ 0.5
GABRA4P48169 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GABRA4P48169 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GABRA4P48169 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.15■□□□□ 0.5
GABRA4P48169 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
GABRA4P48169 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
GABRA4P48169 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
GABRA4P48169 AC104076.2-201ENST00000448912 469 ntBASIC18.15■□□□□ 0.5
GABRA4P48169 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.15■□□□□ 0.5
GABRA4P48169 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.15■□□□□ 0.5
GABRA4P48169 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.15■□□□□ 0.5
GABRA4P48169 AC010331.1-201ENST00000611423 582 ntBASIC18.15■□□□□ 0.5
GABRA4P48169 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
GABRA4P48169 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
GABRA4P48169 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GABRA4P48169 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.14■□□□□ 0.5
GABRA4P48169 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GABRA4P48169 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GABRA4P48169 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
GABRA4P48169 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.14■□□□□ 0.49
GABRA4P48169 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.14■□□□□ 0.49
GABRA4P48169 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
GABRA4P48169 AC006011.2-201ENST00000621313 1158 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms