Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CXCL12P48061 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL12P48061 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CXCL12P48061 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.08■□□□□ 0.65
CXCL12P48061 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL12P48061 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL12P48061 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
CXCL12P48061 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CXCL12P48061 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.08■□□□□ 0.64
CXCL12P48061 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.08■□□□□ 0.64
CXCL12P48061 AC091304.2-201ENST00000564639 760 ntBASIC19.08■□□□□ 0.64
CXCL12P48061 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.08■□□□□ 0.64
CXCL12P48061 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.08■□□□□ 0.64
CXCL12P48061 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.08■□□□□ 0.64
CXCL12P48061 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CXCL12P48061 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL12P48061 GPAT2P1-201ENST00000444924 1672 ntBASIC19.08■□□□□ 0.64
CXCL12P48061 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CXCL12P48061 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
CXCL12P48061 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.07■□□□□ 0.64
CXCL12P48061 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.07■□□□□ 0.64
CXCL12P48061 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CXCL12P48061 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.07■□□□□ 0.64
CXCL12P48061 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.07■□□□□ 0.64
CXCL12P48061 AL160237.2-201ENST00000556165 472 ntBASIC19.07■□□□□ 0.64
CXCL12P48061 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CXCL12P48061 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CXCL12P48061 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.07■□□□□ 0.64
CXCL12P48061 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.07■□□□□ 0.64
CXCL12P48061 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXCL12P48061 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 AL022342.1-201ENST00000400363 863 ntBASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 TSPY22P-201ENST00000427496 604 ntBASIC19.06■□□□□ 0.64
CXCL12P48061 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.06■□□□□ 0.64
CXCL12P48061 AL732292.2-201ENST00000609649 430 ntBASIC19.06■□□□□ 0.64
CXCL12P48061 AL031008.1-201ENST00000619963 541 ntBASIC19.06■□□□□ 0.64
CXCL12P48061 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CXCL12P48061 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXCL12P48061 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CXCL12P48061 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CXCL12P48061 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXCL12P48061 HLA-F-220ENST00000434407 884 ntBASIC19.05■□□□□ 0.64
CXCL12P48061 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.05■□□□□ 0.64
CXCL12P48061 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.05■□□□□ 0.64
CXCL12P48061 AP000867.3-201ENST00000524675 377 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms