Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC28.71■■■□□ 2.19
KDM5CP41229 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.71■■■□□ 2.19
KDM5CP41229 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KDM5CP41229 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM5CP41229 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM5CP41229 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KDM5CP41229 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
KDM5CP41229 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.7■■■□□ 2.19
KDM5CP41229 AC009237.14-201ENST00000609975 1594 ntBASIC28.7■■■□□ 2.19
KDM5CP41229 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC28.7■■■□□ 2.19
KDM5CP41229 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
KDM5CP41229 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
KDM5CP41229 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
KDM5CP41229 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC28.7■■■□□ 2.18
KDM5CP41229 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC28.7■■■□□ 2.18
KDM5CP41229 AL136038.4-201ENST00000603606 1261 ntBASIC28.7■■■□□ 2.18
KDM5CP41229 AC024243.1-201ENST00000609234 778 ntBASIC28.7■■■□□ 2.18
KDM5CP41229 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
KDM5CP41229 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
KDM5CP41229 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
KDM5CP41229 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
KDM5CP41229 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC28.69■■■□□ 2.18
KDM5CP41229 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
KDM5CP41229 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC28.69■■■□□ 2.18
KDM5CP41229 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
KDM5CP41229 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC28.69■■■□□ 2.18
KDM5CP41229 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
KDM5CP41229 AL157888.1-201ENST00000631930 593 ntBASIC28.69■■■□□ 2.18
KDM5CP41229 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC28.69■■■□□ 2.18
KDM5CP41229 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
KDM5CP41229 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC28.68■■■□□ 2.18
KDM5CP41229 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC28.68■■■□□ 2.18
KDM5CP41229 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC28.68■■■□□ 2.18
KDM5CP41229 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.68■■■□□ 2.18
KDM5CP41229 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC28.68■■■□□ 2.18
KDM5CP41229 MIR662-201ENST00000384847 95 ntBASIC28.68■■■□□ 2.18
KDM5CP41229 RNF126P1-202ENST00000569893 925 ntBASIC28.68■■■□□ 2.18
KDM5CP41229 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC28.68■■■□□ 2.18
KDM5CP41229 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KDM5CP41229 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC28.67■■■□□ 2.18
KDM5CP41229 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
KDM5CP41229 AP000593.1-201ENST00000393668 712 ntBASIC28.67■■■□□ 2.18
KDM5CP41229 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.67■■■□□ 2.18
KDM5CP41229 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
KDM5CP41229 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
KDM5CP41229 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC28.67■■■□□ 2.18
KDM5CP41229 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC28.67■■■□□ 2.18
KDM5CP41229 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC28.67■■■□□ 2.18
KDM5CP41229 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
KDM5CP41229 TOB2P1-201ENST00000469761 992 ntBASIC28.67■■■□□ 2.18
KDM5CP41229 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC28.67■■■□□ 2.18
KDM5CP41229 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KDM5CP41229 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.67■■■□□ 2.18
KDM5CP41229 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC28.67■■■□□ 2.18
KDM5CP41229 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM5CP41229 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC28.66■■■□□ 2.18
KDM5CP41229 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
KDM5CP41229 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KDM5CP41229 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
KDM5CP41229 MRPL3P1-201ENST00000400109 1033 ntBASIC28.66■■■□□ 2.18
KDM5CP41229 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KDM5CP41229 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC28.66■■■□□ 2.18
KDM5CP41229 MIR3180-5-201ENST00000583743 153 ntBASIC28.66■■■□□ 2.18
KDM5CP41229 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
KDM5CP41229 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM5CP41229 AC104417.2-201ENST00000562989 1793 ntBASIC28.66■■■□□ 2.18
KDM5CP41229 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
KDM5CP41229 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC28.66■■■□□ 2.18
KDM5CP41229 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
KDM5CP41229 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC28.65■■■□□ 2.18
KDM5CP41229 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
KDM5CP41229 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
KDM5CP41229 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.65■■■□□ 2.18
KDM5CP41229 KRT18P31-201ENST00000506277 1292 ntBASIC28.65■■■□□ 2.18
KDM5CP41229 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC28.65■■■□□ 2.18
KDM5CP41229 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms