Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.83■□□□□ 0.93
USP8P40818 CD99P1-205ENST00000527459 561 ntBASIC20.83■□□□□ 0.93
USP8P40818 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.83■□□□□ 0.93
USP8P40818 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.83■□□□□ 0.93
USP8P40818 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP8P40818 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.83■□□□□ 0.92
USP8P40818 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
USP8P40818 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP8P40818 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.82■□□□□ 0.92
USP8P40818 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 KRT18P16-201ENST00000510337 1294 ntBASIC20.82■□□□□ 0.92
USP8P40818 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.82■□□□□ 0.92
USP8P40818 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.82■□□□□ 0.92
USP8P40818 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.82■□□□□ 0.92
USP8P40818 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.82■□□□□ 0.92
USP8P40818 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP8P40818 NBPF21P-201ENST00000425093 1451 ntBASIC20.81■□□□□ 0.92
USP8P40818 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
USP8P40818 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP8P40818 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.81■□□□□ 0.92
USP8P40818 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP8P40818 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.81■□□□□ 0.92
USP8P40818 MTDHP1-201ENST00000605323 784 ntBASIC20.81■□□□□ 0.92
USP8P40818 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.81■□□□□ 0.92
USP8P40818 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.81■□□□□ 0.92
USP8P40818 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP8P40818 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
USP8P40818 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 AP000974.1-201ENST00000623909 2387 ntBASIC20.8■□□□□ 0.92
USP8P40818 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.8■□□□□ 0.92
USP8P40818 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.8■□□□□ 0.92
USP8P40818 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 AL023875.1-201ENST00000640777 796 ntBASIC20.8■□□□□ 0.92
USP8P40818 AC004408.2-201ENST00000623613 2777 ntBASIC20.8■□□□□ 0.92
USP8P40818 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP8P40818 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
USP8P40818 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP8P40818 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP8P40818 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
USP8P40818 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.79■□□□□ 0.92
USP8P40818 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms