Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
COL4A5P29400 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL4A5P29400 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.06■■□□□ 1.28
COL4A5P29400 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.06■■□□□ 1.28
COL4A5P29400 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL4A5P29400 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.06■■□□□ 1.28
COL4A5P29400 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.06■■□□□ 1.28
COL4A5P29400 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL4A5P29400 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A5P29400 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A5P29400 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.05■■□□□ 1.28
COL4A5P29400 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.05■■□□□ 1.28
COL4A5P29400 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A5P29400 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.05■■□□□ 1.28
COL4A5P29400 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.05■■□□□ 1.28
COL4A5P29400 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL4A5P29400 AL136038.4-201ENST00000603606 1261 ntBASIC23.05■■□□□ 1.28
COL4A5P29400 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.05■■□□□ 1.28
COL4A5P29400 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.05■■□□□ 1.28
COL4A5P29400 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.05■■□□□ 1.28
COL4A5P29400 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.04■■□□□ 1.28
COL4A5P29400 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A5P29400 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
COL4A5P29400 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A5P29400 AL391807.1-203ENST00000604392 2365 ntBASIC23.04■■□□□ 1.28
COL4A5P29400 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A5P29400 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A5P29400 TSPY22P-201ENST00000427496 604 ntBASIC23.04■■□□□ 1.28
COL4A5P29400 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.04■■□□□ 1.28
COL4A5P29400 TOB2P1-201ENST00000469761 992 ntBASIC23.04■■□□□ 1.28
COL4A5P29400 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.04■■□□□ 1.28
COL4A5P29400 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.04■■□□□ 1.28
COL4A5P29400 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.04■■□□□ 1.28
COL4A5P29400 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL4A5P29400 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.04■■□□□ 1.28
COL4A5P29400 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
COL4A5P29400 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A5P29400 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A5P29400 MIR662-201ENST00000384847 95 ntBASIC23.03■■□□□ 1.28
COL4A5P29400 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A5P29400 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
COL4A5P29400 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.03■■□□□ 1.28
COL4A5P29400 LINC00265-3P-201ENST00000447588 903 ntBASIC23.03■■□□□ 1.28
COL4A5P29400 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.03■■□□□ 1.28
COL4A5P29400 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.03■■□□□ 1.28
COL4A5P29400 AC012615.1-201ENST00000565797 1299 ntBASIC23.03■■□□□ 1.28
COL4A5P29400 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.03■■□□□ 1.28
COL4A5P29400 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.03■■□□□ 1.28
COL4A5P29400 LINC00565-201ENST00000562710 2331 ntBASIC23.03■■□□□ 1.28
COL4A5P29400 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A5P29400 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL4A5P29400 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 FOSL1P1-201ENST00000511041 816 ntBASIC23.03■■□□□ 1.28
COL4A5P29400 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.03■■□□□ 1.28
COL4A5P29400 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COL4A5P29400 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL4A5P29400 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.02■■□□□ 1.28
COL4A5P29400 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 KRT18P31-201ENST00000506277 1292 ntBASIC23.02■■□□□ 1.28
COL4A5P29400 AP000867.3-201ENST00000524675 377 ntBASIC23.02■■□□□ 1.28
COL4A5P29400 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.02■■□□□ 1.28
COL4A5P29400 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL4A5P29400 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.02■■□□□ 1.28
COL4A5P29400 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.02■■□□□ 1.28
COL4A5P29400 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
COL4A5P29400 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
COL4A5P29400 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.01■■□□□ 1.27
COL4A5P29400 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.01■■□□□ 1.27
COL4A5P29400 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
COL4A5P29400 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL4A5P29400 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.01■■□□□ 1.27
COL4A5P29400 SDHAP1-207ENST00000440850 2000 ntBASIC23.01■■□□□ 1.27
COL4A5P29400 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL4A5P29400 AKR1C7P-201ENST00000305623 895 ntBASIC23■■□□□ 1.27
COL4A5P29400 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms