Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD40P25942 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.52■□□□□ 0.24
CD40P25942 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CD40P25942 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD40P25942 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.52■□□□□ 0.24
CD40P25942 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.52■□□□□ 0.24
CD40P25942 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CD40P25942 AL049597.2-201ENST00000565575 961 ntBASIC16.52■□□□□ 0.24
CD40P25942 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.52■□□□□ 0.24
CD40P25942 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD40P25942 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD40P25942 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.52■□□□□ 0.24
CD40P25942 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.52■□□□□ 0.23
CD40P25942 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD40P25942 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.51■□□□□ 0.23
CD40P25942 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD40P25942 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.51■□□□□ 0.23
CD40P25942 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.51■□□□□ 0.23
CD40P25942 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CD40P25942 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.51■□□□□ 0.23
CD40P25942 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CD40P25942 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 TSPY23P-201ENST00000440136 739 ntBASIC16.51■□□□□ 0.23
CD40P25942 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.51■□□□□ 0.23
CD40P25942 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CD40P25942 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.51■□□□□ 0.23
CD40P25942 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.51■□□□□ 0.23
CD40P25942 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.51■□□□□ 0.23
CD40P25942 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.51■□□□□ 0.23
CD40P25942 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.51■□□□□ 0.23
CD40P25942 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 AC125437.2-201ENST00000625180 2167 ntBASIC16.51■□□□□ 0.23
CD40P25942 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD40P25942 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.5■□□□□ 0.23
CD40P25942 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CD40P25942 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.5■□□□□ 0.23
CD40P25942 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.5■□□□□ 0.23
CD40P25942 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD40P25942 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.5■□□□□ 0.23
CD40P25942 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD40P25942 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 BX664615.1-201ENST00000443558 458 ntBASIC16.49■□□□□ 0.23
CD40P25942 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
CD40P25942 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms