Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
XRCC1P18887 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC1P18887 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.1■□□□□ 0.65
XRCC1P18887 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
XRCC1P18887 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
XRCC1P18887 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC1P18887 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.1■□□□□ 0.65
XRCC1P18887 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC1P18887 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
XRCC1P18887 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
XRCC1P18887 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.1■□□□□ 0.65
XRCC1P18887 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.09■□□□□ 0.65
XRCC1P18887 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.09■□□□□ 0.65
XRCC1P18887 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.09■□□□□ 0.65
XRCC1P18887 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
XRCC1P18887 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 FAM197Y1-201ENST00000421178 764 ntBASIC19.09■□□□□ 0.65
XRCC1P18887 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
XRCC1P18887 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.09■□□□□ 0.65
XRCC1P18887 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.09■□□□□ 0.65
XRCC1P18887 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.09■□□□□ 0.65
XRCC1P18887 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
XRCC1P18887 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC1P18887 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
XRCC1P18887 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.65
XRCC1P18887 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.08■□□□□ 0.65
XRCC1P18887 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.08■□□□□ 0.65
XRCC1P18887 LETM1P2-201ENST00000597330 2178 ntBASIC19.08■□□□□ 0.65
XRCC1P18887 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.08■□□□□ 0.65
XRCC1P18887 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
XRCC1P18887 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.08■□□□□ 0.64
XRCC1P18887 AL355355.2-201ENST00000442321 338 ntBASIC19.08■□□□□ 0.64
XRCC1P18887 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.08■□□□□ 0.64
XRCC1P18887 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.08■□□□□ 0.64
XRCC1P18887 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.08■□□□□ 0.64
XRCC1P18887 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.08■□□□□ 0.64
XRCC1P18887 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.08■□□□□ 0.64
XRCC1P18887 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.08■□□□□ 0.64
XRCC1P18887 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC1P18887 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
XRCC1P18887 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC1P18887 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
XRCC1P18887 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC1P18887 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC1P18887 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
XRCC1P18887 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC1P18887 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.07■□□□□ 0.64
XRCC1P18887 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 AP003071.4-201ENST00000562276 1284 ntBASIC19.07■□□□□ 0.64
XRCC1P18887 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC1P18887 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC1P18887 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.07■□□□□ 0.64
XRCC1P18887 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
XRCC1P18887 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
XRCC1P18887 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
XRCC1P18887 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
XRCC1P18887 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
XRCC1P18887 AC120498.9-201ENST00000339021 3867 ntBASIC19.06■□□□□ 0.64
XRCC1P18887 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
XRCC1P18887 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms