Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN1P18031 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PTPN1P18031 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTPN1P18031 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 KRT18P22-201ENST00000402024 1347 ntBASIC20.28■□□□□ 0.84
PTPN1P18031 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
PTPN1P18031 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PTPN1P18031 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN1P18031 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
PTPN1P18031 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN1P18031 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN1P18031 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN1P18031 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 INGX-201ENST00000359239 846 ntBASIC20.27■□□□□ 0.84
PTPN1P18031 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN1P18031 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN1P18031 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN1P18031 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN1P18031 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PTPN1P18031 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PTPN1P18031 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN1P18031 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN1P18031 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN1P18031 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PTPN1P18031 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN1P18031 SLC25A1P2-201ENST00000430693 912 ntBASIC20.26■□□□□ 0.83
PTPN1P18031 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN1P18031 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN1P18031 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN1P18031 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN1P18031 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
PTPN1P18031 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PTPN1P18031 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTPN1P18031 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN1P18031 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN1P18031 TEX21P-204ENST00000641479 1693 ntBASIC20.26■□□□□ 0.83
PTPN1P18031 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN1P18031 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN1P18031 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.25■□□□□ 0.83
PTPN1P18031 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.25■□□□□ 0.83
PTPN1P18031 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PTPN1P18031 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN1P18031 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN1P18031 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms