Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC096733.2-201ENST00000609937 1394 ntBASIC20.3■□□□□ 0.84
CCDC130P13994 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC130P13994 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC130P13994 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC130P13994 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC130P13994 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC130P13994 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC130P13994 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC130P13994 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC130P13994 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC130P13994 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC130P13994 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC130P13994 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC130P13994 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC130P13994 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC130P13994 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC130P13994 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC130P13994 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC130P13994 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC130P13994 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC130P13994 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCDC130P13994 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC130P13994 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC130P13994 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC130P13994 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC130P13994 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC130P13994 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CCDC130P13994 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC130P13994 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC130P13994 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC130P13994 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CCDC130P13994 AC211429.1-201ENST00000415277 523 ntBASIC20.27■□□□□ 0.84
CCDC130P13994 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC130P13994 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC130P13994 CKBP1-201ENST00000565489 1086 ntBASIC20.27■□□□□ 0.84
CCDC130P13994 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC130P13994 AC133561.5-201ENST00000635547 218 ntBASIC20.27■□□□□ 0.84
CCDC130P13994 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC130P13994 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC130P13994 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC130P13994 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.27■□□□□ 0.84
CCDC130P13994 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC130P13994 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC130P13994 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.27■□□□□ 0.83
CCDC130P13994 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC130P13994 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC130P13994 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC130P13994 TSPY21P-201ENST00000433481 731 ntBASIC20.26■□□□□ 0.83
CCDC130P13994 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC130P13994 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
CCDC130P13994 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC130P13994 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC130P13994 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC130P13994 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC130P13994 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC130P13994 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms