Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.97□□□□□ -0.01
CD28P10747 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.97□□□□□ -0.01
CD28P10747 AL353719.1-201ENST00000566847 864 ntBASIC14.97□□□□□ -0.01
CD28P10747 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CD28P10747 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.97□□□□□ -0.01
CD28P10747 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD28P10747 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CD28P10747 GABARAPL3-202ENST00000624044 1851 ntBASIC14.97□□□□□ -0.01
CD28P10747 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD28P10747 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CD28P10747 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.97□□□□□ -0.01
CD28P10747 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.96□□□□□ -0.01
CD28P10747 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.96□□□□□ -0.01
CD28P10747 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.96□□□□□ -0.01
CD28P10747 COX11P1-201ENST00000489116 835 ntBASIC14.96□□□□□ -0.01
CD28P10747 AC063952.2-201ENST00000498792 1227 ntBASIC14.96□□□□□ -0.01
CD28P10747 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.96□□□□□ -0.01
CD28P10747 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.96□□□□□ -0.01
CD28P10747 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD28P10747 CKBP1-201ENST00000565489 1086 ntBASIC14.96□□□□□ -0.01
CD28P10747 LINC01238-205ENST00000567549 1107 ntBASIC14.96□□□□□ -0.01
CD28P10747 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.96□□□□□ -0.01
CD28P10747 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CD28P10747 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CD28P10747 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.96□□□□□ -0.01
CD28P10747 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.96□□□□□ -0.01
CD28P10747 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.96□□□□□ -0.02
CD28P10747 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.96□□□□□ -0.02
CD28P10747 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CD28P10747 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.95□□□□□ -0.02
CD28P10747 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD28P10747 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 RNF152P1-201ENST00000397754 604 ntBASIC14.95□□□□□ -0.02
CD28P10747 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.95□□□□□ -0.02
CD28P10747 YBX1P2-201ENST00000489612 999 ntBASIC14.95□□□□□ -0.02
CD28P10747 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.95□□□□□ -0.02
CD28P10747 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.95□□□□□ -0.02
CD28P10747 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.95□□□□□ -0.02
CD28P10747 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CD28P10747 AC141257.4-201ENST00000634557 245 ntBASIC14.95□□□□□ -0.02
CD28P10747 AC136944.6-201ENST00000634818 245 ntBASIC14.95□□□□□ -0.02
CD28P10747 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.95□□□□□ -0.02
CD28P10747 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CD28P10747 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.95□□□□□ -0.02
CD28P10747 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD28P10747 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD28P10747 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD28P10747 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms