Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 AC073314.1-201ENST00000568729 2216 ntBASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.39■■□□□ 1.65
CSB-PGBD3P0DP91 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 AL121672.3-201ENST00000608644 468 ntBASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSB-PGBD3P0DP91 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 AC111152.3-201ENST00000569699 673 ntBASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CSB-PGBD3P0DP91 GPAT2P1-201ENST00000444924 1672 ntBASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 AC016734.2-201ENST00000624325 1377 ntBASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 AC104417.2-201ENST00000562989 1793 ntBASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CSB-PGBD3P0DP91 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 AC004870.1-201ENST00000315132 882 ntBASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 AC036111.1-201ENST00000533973 1582 ntBASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CSB-PGBD3P0DP91 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CSB-PGBD3P0DP91 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms