Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.94■□□□□ 0.94
CLTAP09496 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 KRT8P41-201ENST00000533985 1514 ntBASIC20.94■□□□□ 0.94
CLTAP09496 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLTAP09496 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.94■□□□□ 0.94
CLTAP09496 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.94■□□□□ 0.94
CLTAP09496 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 MMP23A-201ENST00000234610 1017 ntBASIC20.94■□□□□ 0.94
CLTAP09496 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.94■□□□□ 0.94
CLTAP09496 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 FITM1-202ENST00000559294 800 ntBASIC20.94■□□□□ 0.94
CLTAP09496 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.94■□□□□ 0.94
CLTAP09496 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
CLTAP09496 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLTAP09496 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLTAP09496 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CLTAP09496 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.93■□□□□ 0.94
CLTAP09496 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.93■□□□□ 0.94
CLTAP09496 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 MIR1238-201ENST00000408483 83 ntBASIC20.93■□□□□ 0.94
CLTAP09496 FAM207BP-201ENST00000447172 505 ntBASIC20.93■□□□□ 0.94
CLTAP09496 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.93■□□□□ 0.94
CLTAP09496 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.93■□□□□ 0.94
CLTAP09496 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.93■□□□□ 0.94
CLTAP09496 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLTAP09496 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLTAP09496 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.92■□□□□ 0.94
CLTAP09496 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CLTAP09496 AC087499.1-201ENST00000418141 1075 ntBASIC20.92■□□□□ 0.94
CLTAP09496 AC097488.1-201ENST00000507834 756 ntBASIC20.92■□□□□ 0.94
CLTAP09496 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.92■□□□□ 0.94
CLTAP09496 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.92■□□□□ 0.94
CLTAP09496 AP005242.2-201ENST00000580065 1175 ntBASIC20.92■□□□□ 0.94
CLTAP09496 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.92■□□□□ 0.94
CLTAP09496 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLTAP09496 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.92■□□□□ 0.94
CLTAP09496 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CLTAP09496 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.92■□□□□ 0.94
CLTAP09496 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLTAP09496 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLTAP09496 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLTAP09496 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLTAP09496 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.91■□□□□ 0.94
CLTAP09496 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.91■□□□□ 0.94
CLTAP09496 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLTAP09496 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLTAP09496 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.9■□□□□ 0.94
CLTAP09496 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLTAP09496 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms