Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL1P09341 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CXCL1P09341 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL1P09341 AC134043.2-201ENST00000624206 2238 ntBASIC14.86□□□□□ -0.03
CXCL1P09341 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 AC135776.1-201ENST00000319817 2481 ntBASIC14.86□□□□□ -0.03
CXCL1P09341 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 KRT8P36-201ENST00000489121 1440 ntBASIC14.86□□□□□ -0.03
CXCL1P09341 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CXCL1P09341 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.86□□□□□ -0.03
CXCL1P09341 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.86□□□□□ -0.03
CXCL1P09341 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.86□□□□□ -0.03
CXCL1P09341 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.86□□□□□ -0.03
CXCL1P09341 AC008764.7-201ENST00000593779 1081 ntBASIC14.86□□□□□ -0.03
CXCL1P09341 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL1P09341 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL1P09341 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL1P09341 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL1P09341 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL1P09341 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CXCL1P09341 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL1P09341 AL358852.1-201ENST00000623174 1268 ntBASIC14.85□□□□□ -0.03
CXCL1P09341 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL1P09341 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 AIRN-201ENST00000601203 4374 ntBASIC14.85□□□□□ -0.03
CXCL1P09341 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL1P09341 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCL1P09341 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL1P09341 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL1P09341 AL645608.8-201ENST00000606034 2086 ntBASIC14.85□□□□□ -0.03
CXCL1P09341 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL1P09341 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL1P09341 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL1P09341 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL1P09341 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
CXCL1P09341 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms