Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.33■□□□□ 0.68
RETP07949 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.33■□□□□ 0.68
RETP07949 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.33■□□□□ 0.68
RETP07949 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.33■□□□□ 0.68
RETP07949 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
RETP07949 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.33■□□□□ 0.68
RETP07949 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.33■□□□□ 0.68
RETP07949 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.68
RETP07949 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.33■□□□□ 0.68
RETP07949 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.33■□□□□ 0.68
RETP07949 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RETP07949 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.33■□□□□ 0.68
RETP07949 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RETP07949 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 AC112907.3-201ENST00000577781 2400 ntBASIC19.32■□□□□ 0.68
RETP07949 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RETP07949 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.32■□□□□ 0.68
RETP07949 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.32■□□□□ 0.68
RETP07949 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.32■□□□□ 0.68
RETP07949 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.32■□□□□ 0.68
RETP07949 HLA-A-209ENST00000638375 975 ntBASIC19.32■□□□□ 0.68
RETP07949 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.32■□□□□ 0.68
RETP07949 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.32■□□□□ 0.68
RETP07949 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.32■□□□□ 0.68
RETP07949 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RETP07949 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RETP07949 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
RETP07949 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.31■□□□□ 0.68
RETP07949 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RETP07949 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.31■□□□□ 0.68
RETP07949 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.31■□□□□ 0.68
RETP07949 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 FDX1P1-201ENST00000449115 551 ntBASIC19.31■□□□□ 0.68
RETP07949 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.31■□□□□ 0.68
RETP07949 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.31■□□□□ 0.68
RETP07949 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.31■□□□□ 0.68
RETP07949 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.31■□□□□ 0.68
RETP07949 ZNF444P1-201ENST00000559497 298 ntBASIC19.31■□□□□ 0.68
RETP07949 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.31■□□□□ 0.68
RETP07949 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 GPALPP1-207ENST00000611650 899 ntBASIC19.31■□□□□ 0.68
RETP07949 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RETP07949 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RETP07949 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.3■□□□□ 0.68
RETP07949 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 AP000523.1-201ENST00000398242 1049 ntBASIC19.3■□□□□ 0.68
RETP07949 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.3■□□□□ 0.68
RETP07949 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.3■□□□□ 0.68
RETP07949 CA15P1-201ENST00000481698 905 ntBASIC19.3■□□□□ 0.68
RETP07949 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.3■□□□□ 0.68
RETP07949 RN7SL510P-201ENST00000581311 263 ntBASIC19.3■□□□□ 0.68
RETP07949 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.3■□□□□ 0.68
RETP07949 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.3■□□□□ 0.68
RETP07949 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.3■□□□□ 0.68
RETP07949 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.3■□□□□ 0.68
RETP07949 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.3■□□□□ 0.68
RETP07949 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RETP07949 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms