Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRAP04437 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TCRAP04437 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRAP04437 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRAP04437 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRAP04437 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TCRAP04437 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRAP04437 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TCRAP04437 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRAP04437 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TCRAP04437 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.57□□□□□ -0.08
TCRAP04437 DUX4L16-201ENST00000555130 1264 ntBASIC14.57□□□□□ -0.08
TCRAP04437 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.57□□□□□ -0.08
TCRAP04437 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRAP04437 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRAP04437 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 AC010980.2-201ENST00000587099 1412 ntBASIC14.57□□□□□ -0.08
TCRAP04437 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TCRAP04437 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRAP04437 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
TCRAP04437 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 AC137761.2-201ENST00000561729 223 ntBASIC14.56□□□□□ -0.08
TCRAP04437 AC145350.3-201ENST00000569033 163 ntBASIC14.56□□□□□ -0.08
TCRAP04437 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRAP04437 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.56□□□□□ -0.08
TCRAP04437 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRAP04437 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRAP04437 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRAP04437 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRAP04437 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRAP04437 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRAP04437 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRAP04437 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms