Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-ND1P03886 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MT-ND1P03886 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND1P03886 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND1P03886 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND1P03886 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-ND1P03886 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-ND1P03886 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND1P03886 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND1P03886 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MT-ND1P03886 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 ZNF815P-204ENST00000434898 1737 ntBASIC18.06■□□□□ 0.48
MT-ND1P03886 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
MT-ND1P03886 AL512353.2-201ENST00000448759 1962 ntBASIC18.06■□□□□ 0.48
MT-ND1P03886 BICD1-207ENST00000551848 1962 ntBASIC18.06■□□□□ 0.48
MT-ND1P03886 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND1P03886 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND1P03886 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND1P03886 HCG11-201ENST00000411553 5696 ntBASIC18.05■□□□□ 0.48
MT-ND1P03886 AL354751.1-201ENST00000412768 1863 ntBASIC18.05■□□□□ 0.48
MT-ND1P03886 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND1P03886 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.05■□□□□ 0.48
MT-ND1P03886 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND1P03886 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND1P03886 AC005181.1-201ENST00000604782 1256 ntBASIC18.05■□□□□ 0.48
MT-ND1P03886 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MT-ND1P03886 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND1P03886 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND1P03886 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND1P03886 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND1P03886 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 Z98044.1-201ENST00000632503 1764 ntBASIC18.04■□□□□ 0.48
MT-ND1P03886 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
MT-ND1P03886 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC004911.1-201ENST00000416316 871 ntBASIC18.04■□□□□ 0.48
MT-ND1P03886 AC093787.1-201ENST00000450396 207 ntBASIC18.04■□□□□ 0.48
MT-ND1P03886 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC023632.3-201ENST00000521633 145 ntBASIC18.04■□□□□ 0.48
MT-ND1P03886 C2orf69P4-201ENST00000565394 541 ntBASIC18.04■□□□□ 0.48
MT-ND1P03886 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND1P03886 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND1P03886 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms