Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
GGPS1O95749 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.51■■□□□ 1.03
GGPS1O95749 AL512604.3-201ENST00000569583 964 ntBASIC21.51■■□□□ 1.03
GGPS1O95749 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
GGPS1O95749 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.51■■□□□ 1.03
GGPS1O95749 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
GGPS1O95749 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.51■■□□□ 1.03
GGPS1O95749 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
GGPS1O95749 SDHAP1-207ENST00000440850 2000 ntBASIC21.51■■□□□ 1.03
GGPS1O95749 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.51■■□□□ 1.03
GGPS1O95749 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
GGPS1O95749 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.5■■□□□ 1.03
GGPS1O95749 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.5■■□□□ 1.03
GGPS1O95749 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.5■■□□□ 1.03
GGPS1O95749 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.5■■□□□ 1.03
GGPS1O95749 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GGPS1O95749 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
GGPS1O95749 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.5■■□□□ 1.03
GGPS1O95749 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.5■■□□□ 1.03
GGPS1O95749 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GGPS1O95749 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.49■■□□□ 1.03
GGPS1O95749 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 KRT8P45-201ENST00000414328 1447 ntBASIC21.49■■□□□ 1.03
GGPS1O95749 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.49■■□□□ 1.03
GGPS1O95749 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 TSPY5P-201ENST00000426936 936 ntBASIC21.49■■□□□ 1.03
GGPS1O95749 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.49■■□□□ 1.03
GGPS1O95749 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.49■■□□□ 1.03
GGPS1O95749 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.49■■□□□ 1.03
GGPS1O95749 LINC01238-205ENST00000567549 1107 ntBASIC21.49■■□□□ 1.03
GGPS1O95749 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.49■■□□□ 1.03
GGPS1O95749 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
GGPS1O95749 AC011558.1-201ENST00000623459 338 ntBASIC21.49■■□□□ 1.03
GGPS1O95749 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
GGPS1O95749 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
GGPS1O95749 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.49■■□□□ 1.03
GGPS1O95749 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.49■■□□□ 1.03
GGPS1O95749 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GGPS1O95749 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
GGPS1O95749 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.48■■□□□ 1.03
GGPS1O95749 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
GGPS1O95749 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.48■■□□□ 1.03
GGPS1O95749 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.48■■□□□ 1.03
GGPS1O95749 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 FAM8A6P-201ENST00000407496 1135 ntBASIC21.48■■□□□ 1.03
GGPS1O95749 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.48■■□□□ 1.03
GGPS1O95749 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.48■■□□□ 1.03
GGPS1O95749 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.48■■□□□ 1.03
GGPS1O95749 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.48■■□□□ 1.03
GGPS1O95749 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.48■■□□□ 1.03
GGPS1O95749 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.48■■□□□ 1.03
GGPS1O95749 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.48■■□□□ 1.03
GGPS1O95749 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
GGPS1O95749 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GGPS1O95749 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.47■■□□□ 1.03
GGPS1O95749 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
GGPS1O95749 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GGPS1O95749 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.47■■□□□ 1.03
GGPS1O95749 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms